Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTVYLSLGSNIGDRETFLKQALFSIDHLQKTKVAQISAIYETAAWGNTNQEDFFNICCQVETDLAPFELLDYCQEIEKRLKRVRHEHWGPRTIDIDILLFGNQVINQEDLVVPHPYMTKRAFVLVPLLEIAPQLSLPNGSKLEDYLEKLNLGEVHYLKPVE
4CWB Chain:A ((4-146))
MIQAYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAPVGYTEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRIRKERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANVVEPR-SKLKVKDLVFVDDSVKRYK---
General information:
TITO was launched using:
RESULT:
Template:
4CWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112948 for 1104 contacts (-102.3/contact) +
2D Compatibility (PS) -15175 + (NN) -6922 + (LL) 20
1D Compatibility (HY) -16000 + (ID) 3450
Total energy: -154475.0 ( -139.92 by residue)
QMean score : 0.505
(partial model without unconserved sides chains):
PDB file :
Tito_4CWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CWB-query.scw
PDB file :
Tito_Scwrl_4CWB.pdb
: