Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKIYLNKCRFYGYHGAFSEEQTLGQVFQVDAVLSLDLAKASQTDDLIDTVHYGEVFDCIKNHVENEQYQLIEKLAGVIVEDIFLQFHPVQAITLKITKDNPPINGHYESVGIELERKRV
1RS4 Chain:A ((3-119))
-DTIFLKGMRFYGYHGALSAENEIGQIFKVDVTLKVDLSEAGRTDNVIDTVHYGEVFEEVKSIMEGKAVNLLEHLAERIANRINSQYNRVMETKVRITKENPPIPGHYDGVGIEIVRENK
General information:
TITO was launched using:
RESULT:
Template:
1RS4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80732 for 824 contacts (-98.0/contact) +
2D Compatibility (PS) -12336 + (NN) -3813 + (LL) 208
1D Compatibility (HY) -12400 + (ID) 2950
Total energy: -112023.0 ( -135.95 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_1RS4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1RS4-query.scw
PDB file :
Tito_Scwrl_1RS4.pdb
: