Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKKDKKIEIQISDAQVTVNGTKVDGYQLVIGKKIVGQIAELDSKFAVIKGEQVSGFYKNLDQAMGNIIEEYNLNR
1A57 Chain:A ((44-95))
----DVVFELGVDFAYSLADGTELTGTWTMEGNKLVGKFKRVDNGKELIAVREISGNELIQTYTYEGVEAKRIFKK
General information:
TITO was launched using:
RESULT:
Template:
1A57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5220 for 287 contacts (18.2/contact) +
2D Compatibility (PS) -5097 + (NN) 2313 + (LL) 308
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -356.0 ( -1.24 by residue)
QMean score : 0.113
(partial model without unconserved sides chains):
PDB file :
Tito_1A57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1A57-query.scw
PDB file :
Tito_Scwrl_1A57.pdb
: