Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIDYIDLALTYGGFTSLDKVYLEKKLDGLSKQQRLDFITPPPSVINAYFAEIYQKQGPEAATDYYFDLSKALGLFPKHLSFDEEKPFIRLNLSGKSFGFAYLNDQEEASVFSEVKEVITPQLLLEIAQIFPQYKVYQDRSGIRMAKIDFDETESQNITPETSLLGNVLQLKKDIIKITSFNQEELLELVKTKSGKYYYSSQGRESVIYIDTKSTN |
| 3PEA Chain:A ((182-234)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------GVFAEETFLDDTLKVAKQIAGKSPATARAVLELLQTTKSSHYYEGVQREAQIFGEVFTSE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PEA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5834 for 213 contacts (27.4/contact) +
2D Compatibility (PS) -5572 + (NN) -963 + (LL) 10764
1D Compatibility (HY) -3200 + (ID) 700
Total energy: 6163.0 ( 28.93 by residue)
QMean score : 0.119
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