Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAYIWSYLKRYPNWLWLDLLGAMLFVTVILGM-------------PTALAGMIDNGVTKGDRTGVYLWTFI---MFIFVVLGIIGRITMAYASSRLTTTMIRDMRNDMYAKLQEYSHHEYEQIGVSSLVTRMTSDT-----FVLMQFAEMSLRLGLVTPMVMIFSVVMILITSPSLAWLVAVAMPLLVGVVLYVAIKTKPLSERQQTMLDKINQYVRENLTGLRVVRAFARENFQSQKFQVANQRY-----TDTSTGLFKLTGLTEPLFVQIIIAMIVAIVWFALDPLQRGAIKIGDLVAFIEYSFHALFSFL--LFANLFTMYPRMVVSSHRIREVMDMPISINPNAEGVTDTKLK-GHLEFDNVTFAYPGETESPVLHDISFKAKPGETIAFIGSTGSGKSSLVNLIPRFYDVTLGKILVDGVDVRDYNLKSLRQKIGFIPQKALLFTGTIGENLKYGKADATIDDLRQAVDISQAKEFIESHQEAFETHLAEGGSNLSGGQKQRLSIARAVVKDPDLYIFDDSFSALDYKTDATLRARLKEVTGDSTVLIVAQRVGTIMDADQIIVLDEGEIVGRGTHAQLIENNAIYREIAESQLKNQNLSEGE |
| 2HYD Chain:A ((16-576)) | -----------------------IFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGL--MNIWLDCIT-IIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLR-KLTRERSQA-LAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVG-AYLAIS----GSITVGTLAAFVGY-LELLFGPLRRLVAS-FTTLTQSFASMDRVFQLIDEDYDIK-NGVGAQPIEIKQGRIDIDHVSFQY-NDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQNL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -298920 for 3959 contacts (-75.5/contact) +
2D Compatibility (PS) -56068 + (NN) -13296 + (LL) 3348
1D Compatibility (HY) -52800 + (ID) 9000
Total energy: -426736.0 ( -107.79 by residue)
QMean score : 0.401
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