Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRKEIIDDVTMKRAITRITYEIIERNKNLDNIVLAGIKTRGVFLAKRIQERLKQLENLDIPVGELDTKPFRDDMKVEVDTTTMPVDITDKDIILIDDVLYTGRTIRAAIDNLVSLGRPSRVSLAVLIDRGHRELPIRADYVGKNIPTSQFEEILVEVMEHDGYDRVSIIDPS
1XZ8 Chain:A ((1-176))
MQKAVVMDEQAIRRALTRIAHEIIERNKGIDGCVLVGIKTRGIYLARRLAERIEQIEGASVPVGELDITLYRD----------VPFPVTERNVILVDDVLFTGRTVRAAMDAVMDLGRPARIQLAVLVDRGHRELPIRADFVGKNVPTSRSELIVVELSEVDGIDQVSIHEK-
General information:
TITO was launched using:
RESULT:
Template:
1XZ8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106865 for 1267 contacts (-84.3/contact) +
2D Compatibility (PS) -17073 + (NN) -4770 + (LL) 968
1D Compatibility (HY) -20000 + (ID) 4650
Total energy: -152390.0 ( -120.28 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_1XZ8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XZ8-query.scw
PDB file :
Tito_Scwrl_1XZ8.pdb
: