Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTKNINKKTKKKKSNLPFIILFLIGLSILLYPVVSRFYYTIESNNQTQDFERAAKKLSQKEINRRMTLAQAYNDSLNNVH---LEDPYEKKRIQKGVAEYARMLEVSEKIGTISVPKIGQKLPIFAGSSQEVLSKGAGHLEGTSLPIGGNSTHTVITAHSGIPDKELFSNLKKLKKGDKFYIQNIKETIAYQVDQIKVVTPDNFSDLLVVPGHDYATLLTCTPIMVNTHRLLVRGHRIPYKGLIDEKLMKEGHLNTIYRYLFYISLVIIAWLLWLIKRQRQKNRLASVRKGIES |
3RBI Chain:A ((20-214)) | --------------------------------------------------FKEAVTKIDRVEINRRLELAYAYNASIAGAKYPALKDPY--------VVEYARMLEVKEQIGHVIIPRINQDIPIYAGSAEENLQRGVGHLEGTSLPVGGESTHAVLTAHRGLPTAKLFTNLDKVTVGDRFYIEHIGGKIAYQVDQIKVIAPDQLEDLYVIQGEDHVTLLTCTPYMINSHRLLVRGKRIPYVEK--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RBI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88018 for 1425 contacts (-61.8/contact) +
2D Compatibility (PS) -19317 + (NN) -5793 + (LL) 9244
1D Compatibility (HY) -22000 + (ID) 5450
Total energy: -131334.0 ( -92.16 by residue)
QMean score : 0.469
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