Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTMLKVENLSIHYGVIQAVNDVSFEVNQGEVVTLIGANGTGKTSILRTISGLVRPSQGSISFMGKPIHKLAARKIVGNGLAQVPEGRHVFSSLSVMENLEMGA-----------FLQKDREQNQKMLKKVFD--RFPRLEERKNQDAATLSGGEQQMLAMGRALMSRPKLLLLDEPSMGLAPIFIQEIFNIIEDIKKQGTTVLLVEQNANKALTIADKAYVLETGKVVLSGTGKE----LLVSDQVRKAYLGG
1G9X Chain:A ((5-256))
MEILRTENIVKYFGEFKALDGVSISVCKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEINPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPKVVEIYIG-
General information:
TITO was launched using:
RESULT:
Template:
1G9X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118933 for 1834 contacts (-64.8/contact) +
2D Compatibility (PS) -24723 + (NN) -4806 + (LL) -172
1D Compatibility (HY) -21600 + (ID) 3700
Total energy: -173934.0 ( -94.84 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_1G9X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1G9X-query.scw
PDB file :
Tito_Scwrl_1G9X.pdb
: