Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTYHFIGIKGSGMSALALMLHQMGHNVQGSDVDKYYFTQRG--LEQAGVTI-LPFSPNNISEDLEIIAGNAFRPDNNEELAYVIEKGYHFKRYHEFLGDFMRQFTS-LGVAGAHGKTSTTGLLAHVLKNITDTSFLIGDGTGRGSANANY------FVFEADEYERHFMPYHPEYSIITNIDFDH-PDYFTGLEDVFNAFNDYAKQVQKGLFIYGEDSKLHEITSKAPIYYYGFEDSNDFIAKDITRTVNGSDFK--VFYNQEEIGQFHVPAYGKHNILNATAVIANLYIMGIDMALVAEHLKTFSGVKRRFTEKIID---DTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALSQADSVYLAQIYGSAREVDNG-----EVKVEDLAAK---IVKHSDLVTVENVSPLLNHDNAVYVFMGAGDIQLYERSFEELLANLTKNTQ |
| 1J6U Chain:A ((5-440)) | ------FVGIGGIGMSAVALHEFSNGNDVYGSNIEE---TERTAYLRKLGIPIFVPHSADNWYDPDLVIKTPAVRDDNPEIVRARMERVPIENRLHYFRDTLKREKKEEFAVTGTDGKTTTTAMVAHVLKHLRKSPTVFLGGIMDSLEHGNYEKGNGPVVYELDESEEFFSEFSPNYLIITNARGDHLENYGNSLTRYRSAFEKISRNTDL-VVTFAED----ELTSHLGDVTFGVKKGTYTLE---MRSASRAEQKAMVEKNGKRYLELKLKVPGFHNVLNALAVIALFDSLGYDLAPVLEALEEFRGVHRRFSIAFHDPETNIYVIDDYAHTPDEIRNLLQTAKEVFENEKIVVIFQPHR--------GNFAKALQLADEVVVTEVYD--------SGKMIWDSLKSLGKEAYFVEKLPELEKVISVS-----ENTVFLFVGAGDIIYSSRRFVERYQSSK---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J6U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26187 for 3208 contacts (8.2/contact) +
2D Compatibility (PS) -39153 + (NN) 9493 + (LL) 2688
1D Compatibility (HY) 18400 + (ID) 1300
Total energy: 16315.0 ( 5.09 by residue)
QMean score : 0.060
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