Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKEILVLGAGYAGLKAVRNLQKQSGDFHITLVDMNDYHYEATELHEVAAGSQPKEKITFPIKDVINTNK--VNFMQDEVLKVDAENKTVTVKN--------------------NGELHYDYVVVALGFVSETFGIKGAMENALQMTNISQAENIHNHIVNTMKLYR-----ETKDENLLKLLVCGAGFTGIELAGAMVDE-----RPKYAALAGVKPEQIEIICVEAATRILPMFDDELAQYGVNLIKDLGINLMLGSMIKEIKPGEVVYGTSKEDEEL--KSITAGTIIWTTGVSGSPVMGE------SGFDQRRGRVMVNSDLRDPKYDNVYVIGDVSAFMDTESGRPFPTTAQIATRMGAHVAKNLLHQIKGEATEDFSYSPQGTVASVGNTHGLGVVGKTKIKKYPASVMKKIIMNKSLVDMGGLKELLAKGRFDLYH |
| 4G74 Chain:A ((45-396)) | ---VLILGSGWGAISFLKHIDTKK--YNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALA----EEVQIHLVEALPIVLNMFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKRG-LAVNDFLQVKGSNNIFAIGD-NAFAG------LPPTAQVAHQEAEYLAKNFDKMAQIPNFQDKIDLLFEENNFKPFKYNDLGALAYLGSERAIATIRSGKRTFYTGGGLMTFYLWRILYLSMIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G74.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231722 for 2544 contacts (-91.1/contact) +
2D Compatibility (PS) -34006 + (NN) -13515 + (LL) 280
1D Compatibility (HY) -20800 + (ID) 4400
Total energy: -304163.0 ( -119.56 by residue)
QMean score : 0.540
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