Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPKLTLVYISLSGNTQSFVKRLSEQLSTWHNCQVSTINIKEQNHQTFPVDQPFVALLPTYLEGGNGIDNGDQEILTIPLGDFIAAHNNVKNCIGIVGSGNRNFNNQYCLTAKQYSERFGFPMLGDFELRGTSSDVERIANIIVETLSNFKA
2X2O Chain:A ((1-107))
---MLVAYDSMTGNVKRFI----------HKLNMPAVQIDED----LVIDEDFI--LITYT---TGFGNVPERVL-----DFLERNN--EKLKGVSASGNRNWGDMFGASADKISTKYEVPIVSKFELSGTNNDVEYFKERVREIA-----
General information:
TITO was launched using:
RESULT:
Template:
2X2O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68967 for 822 contacts (-83.9/contact) +
2D Compatibility (PS) -11448 + (NN) -3563 + (LL) 2044
1D Compatibility (HY) -10400 + (ID) 1800
Total energy: -94134.0 ( -114.52 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_2X2O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2X2O-query.scw
PDB file :
Tito_Scwrl_2X2O.pdb
: