Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFKMKTTKGGYTTTLADKIISQKQPIYSLSTELEPQQRFEEGKPTGEIVAYKAWFVQEGQDPFQVKFEETIELPAFQSMIQFDTLQACEVKYNIYFKANGIKEVR
3K6D Chain:A ((26-82))
---------------VSDRIPGSKIKLYGKGVDQEPKGIFKINENSGEVSVTKA-LDREAIPSYQLQVETTDENGKTIEGPVDLEILVID----------------
General information:
TITO was launched using:
RESULT:
Template:
3K6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5825 for 300 contacts (19.4/contact) +
2D Compatibility (PS) -5946 + (NN) -847 + (LL) 2588
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -380.0 ( -1.27 by residue)
QMean score : -0.141
(partial model without unconserved sides chains):
PDB file :
Tito_3K6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3K6D-query.scw
PDB file :
Tito_Scwrl_3K6D.pdb
: