Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLFQSKINYPKKSSIITQITLWYSSFIFILVIGVLIGSFFISKSIAENKSKKNLEAKAVQMSQALAKGHRYEAFEDGIFYSVYDQNGKVIYSGFPKGFKRDLDHQHKHKKKLSLFSMENRTFQYVDIPISGKNQWLRAIRTVDRLDKQLTELLFSLGIVLPLMLIIITVGGYLILKRTFRPIQEITETAQFITQNEDYTKRIITKNNENELTELAAVINTMLASIESSFVREKQFNNDVSHELRTPVTVILSESEYGKNYAE---------NLSEAKESFEVIHRQSLSMKKLVEQLLELTKAEN-PLSIQLEPLNFSIMMKQLVSDSSRLLD--NTPIHLDSQIEDDLWIIGQQTLLKRLFDNLFSNAIKFT-----NNHISISLRQSDNQIVFSIKDNGLGISVDDQSKIWNRFYQVDSARTKDSQSGIGLGLSLVKQIATIHRAKIWVDSKPDNGSQFTLTFPKLKKD |
4JAU Chain:A ((22-247)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFIANISHELRTPLTVI-------KGYAEMIYNSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDS----------GLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -99425 for 1414 contacts (-70.3/contact) +
2D Compatibility (PS) -21718 + (NN) -9166 + (LL) 19864
1D Compatibility (HY) -20000 + (ID) 3350
Total energy: -133795.0 ( -94.62 by residue)
QMean score : 0.461
|
|
|