Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYIQNLELTSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGAIPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQRNHFLKQLQTRKQTDRTMLDVLTDQLVEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKIGDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQ-TYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLSELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK |
| 4NCK Chain:A ((1-298)) | MKLERVTVKNFRSHSDTVVEFKEGINLIIGQNGSGKSSLLDAILV-GLYWPLRIKDIKK-----DEFTKVGAR------DTYIDLIFEKDGTKYRIT---RRFLKGYSS----------------GEIHAMKRLVGNEWKHVTEPSSKAISAFMEKLIPYNIFLNAIYIRQGQIDAILE--SDEAREKVVREVLN----------------------------KVKKYKALAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVWEGKERPLTFLSGGEGIALGLAFRLAMSLYLA---GEISLLILDEPTPYLDEERRRKLITIME----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10992 for 1991 contacts (-5.5/contact) +
2D Compatibility (PS) -28232 + (NN) -4558 + (LL) 8636
1D Compatibility (HY) -17600 + (ID) 3200
Total energy: -55946.0 ( -28.10 by residue)
QMean score : 0.339
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