Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIHLGDDFVVSTRDIVGIFDFKANMSPIVEEFLKKQKHKVVPSVNGTPKSIVVTVQNIYYSPLSSSTLKKRAQFMFEIDS
2L2L Chain:B ((211-219))
-------------------------------------------------KAFIVTDED-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2L2L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 725 for 18 contacts (40.3/contact) +
2D Compatibility (PS) -1110 + (NN) -922 + (LL) 4856
1D Compatibility (HY) -800 + (ID) 150
Total energy: 2599.0 ( 144.39 by residue)
QMean score : 0.186
(partial model without unconserved sides chains):
PDB file :
Tito_2L2L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L2L-query.scw
PDB file :
Tito_Scwrl_2L2L.pdb
: