Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTIGVLGLQGAVREHIHAIEACGAAGLVVKRPEQLNEVDGLILPGGESTTMRRLIDTYQFMEPLREFAAQGKPMFGTCAGLIILAKEIAGSDNPHLGLLNVVVERNSFGRQVDSFEADLTIKGLDEPFTGVFIRAPHILEAGENVEVLSEHNGRIVAAKQGQFLGCSFHPELTEDHRVTQLFVEMVEEYKQKALV
1Q7R Chain:A ((26-213))
---IGVLGLQGAVREHVRAIEACGAEAVIVKKSEQLEGLDGLVLPGGESTTMRRLIDRYGLMEPLKQFAAAGKPMFGTCAGLILLAKRIVGYDEPHLGLMDITVERNSFGRQRESFEAELSIKGVGDGFVGVFIRAPHIVEAGDGVDVLATYNDRIVAARQGQFLGCSFHPELTDDHRLMQYFLNMVKEAK-----
General information:
TITO was launched using:
RESULT:
Template:
1Q7R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -166978 for 1597 contacts (-104.6/contact) +
2D Compatibility (PS) -20027 + (NN) -3393 + (LL) 1132
1D Compatibility (HY) -24400 + (ID) 6750
Total energy: -220416.0 ( -138.02 by residue)
QMean score : 0.612
(partial model without unconserved sides chains):
PDB file :
Tito_1Q7R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q7R-query.scw
PDB file :
Tito_Scwrl_1Q7R.pdb
: