Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEHHIPKNSIITVAGTVGVGKSTLTKTLAKRLGFKTSLEE-------VDHNPYLEKFYHDFERWSFHLQIYFLAERFKEQKTIFEAGGGFVQD--------RSIYEDTGIFAKMHADKGTMSKVDYKTYTSLFEAMVMTPYFPHP---DVLIYLEGDLENILNRIEQRGREMELQTSRSYWEEMHTRYENWISGFNACPVLKLRIEDYDLLNDENSIENIVDQIASVIHDNQKK
2A2Z Chain:A ((27-204))
-----------ISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTNVLQMMYEKPERWSFTFQTYACLSRIRAQ---LASLNGK---EKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWM--NNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWL------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A2Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43424 for 1088 contacts (-39.9/contact) +
2D Compatibility (PS) -16772 + (NN) -4419 + (LL) 4224
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -73241.0 ( -67.32 by residue)
QMean score : 0.433
(partial model without unconserved sides chains):
PDB file :
Tito_2A2Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A2Z-query.scw
PDB file :
Tito_Scwrl_2A2Z.pdb
: