Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTAPFIAIEGPIGAGKTTLATMLSQKF-GFPMINE------IVEDNPYLDKFYDNIKEWSFQLEMFFLCHRYK--------QLEDTSDHFLKKGQPVIADYHIYKNVIFAERTLSPHQLEKYKKIYHLLTDDLPKP---NFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYEV-----AIKQLQEADPELTVLTVDGDSKDFVLNKSDFERIAAHVKELIV
2A30 Chain:A ((27-245))
------ISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVN-E--------YESLVEKVKEFL-
General information:
TITO was launched using:
RESULT:
Template:
2A30.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86334 for 1353 contacts (-63.8/contact) +
2D Compatibility (PS) -20289 + (NN) -9839 + (LL) 784
1D Compatibility (HY) -18000 + (ID) 2700
Total energy: -136378.0 ( -100.80 by residue)
QMean score : 0.456
(partial model without unconserved sides chains):
PDB file :
Tito_2A30.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A30-query.scw
PDB file :
Tito_Scwrl_2A30.pdb
: