Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLIVAVVQDQDSNRLLKTLTDHNFRVTKLATTGGFLKSGNTTFMIGVEDIRVNKALSLIKENGQKRDQMIAPVSPMGGNADSYVPYPVEVEVGGATVFVLPVDEFHQF
4D3H Chain:A ((20-128))
MKMIIAIVQDQDSQELADQLVKNNFRATKLATTGGFLRAGNTTFLCGVNDDRVDEILSVINQTCGNREQLVS---------------PVEVEVGGATVFVMPVDAFHQF
General information:
TITO was launched using:
RESULT:
Template:
4D3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46818 for 602 contacts (-77.8/contact) +
2D Compatibility (PS) -10499 + (NN) -5361 + (LL) -56
1D Compatibility (HY) -11600 + (ID) 3000
Total energy: -77334.0 ( -128.46 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_4D3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4D3H-query.scw
PDB file :
Tito_Scwrl_4D3H.pdb
: