Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADDRDLLIVEENKQEALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGPCGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNILERVLQVELINREKVIEYTWEELLEEGVVSAQTTD |
| 3S6W Chain:A ((20-53)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAEVEAL--SGMTAVVKFIDYGNYEEVLLSNIKP---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13650 for 153 contacts (-89.2/contact) +
2D Compatibility (PS) -2767 + (NN) 3510 + (LL) 17344
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 2937.0 ( 19.20 by residue)
QMean score : 0.489
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