Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNFSRERTITEIQNDYK-EQVER-----QNQLKKRRRKGLYRRLTVFGALVFLTAIVLASSVWSQ--TSSLSAKEEKKEQ-------LEKELKSLKTKQTDLKEEISKLKDEDYVTELARRDLFMSGDGEIIFNVEKKSK |
4JL9 Chain:A ((560-655)) | --------ITEIYYQFKKDKAERRLAYNEEQIHKFDKQKLYYHATK------------AMSHFSEECVRKYEAFKDKSEEWMRKMLHLRKQLLSLTNQCFDIEEEVSKY--QDYTNEL---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JL9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 17998 for 316 contacts (57.0/contact) +
2D Compatibility (PS) -8809 + (NN) -5383 + (LL) 3484
1D Compatibility (HY) -4400 + (ID) 1600
Total energy: 1290.0 ( 4.08 by residue)
QMean score : 0.459
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