Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKSVKDFLNKHNLTLKGATIIVGVSGGPDSMALLHALHTLCGRSANVI--AAHVDHRFRGAESEEDMRFVQAYCKAEQ--LVCETAQINVTAYAQEKGLNKQAAARDCRYQFFEEIMSKHQADYLALAHHGDDQVETMLMKLAKGTLGTGLAGMQPVRRFGTGRIIRPFLTITKEEILHYCHENGLSYRTDESNAKDDYTRNRFRKTVLPFLKQESPDVHKRFQKVSEALTEDEQFLQSLTKDEMNKVITSQSNTSVEINSSQLLALPMPLQRRGVQLILNYLYENVPSSFSAHHIQQFLDWAENGGPSGVLDFPKGLKVVKSYQTCLFTFEQWQCKNVPFEYQISGAADETAVLPNGYLIEARHYADSPEEHGNAVFITSEKKVRFPLTIRTRKAGDRIKLKGMNGSKKVKDIFIDKKLPLQERDNWPIVTDASGEIIWIPGLKKSIFEDLVIPNSDRIVLQYRQHEKCRGQAKS
1NI5 Chain:A ((5-220))-------LNRQLLTSR--QILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGL-SANADAWVTHCENVCQQWQVPLVVERVQL-----AQE-GLGIEAQARQARYQAFARTLLP--GEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTRGELVQWARQYDLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAEQE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1NI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33361 for 1577 contacts (-21.2/contact) +
2D Compatibility (PS) -22774 + (NN) -9222 + (LL) 17020
1D Compatibility (HY) -4400 + (ID) 2850
Total energy: -55587.0 ( -35.25 by residue)
QMean score : 0.374

(partial model without unconserved sides chains):
PDB file : Tito_1NI5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NI5-query.scw
PDB file : Tito_Scwrl_1NI5.pdb: