Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDYLVKALAYDGKVRAYAARTTDMVNEGQRRHGTWPTASAALGRTMTASLMLGAMLKGDDKLTVKIEGGGPIGAIVADANAKGEVRAYVSNPQVHFDLNEQGKLDVRRAVGTNGTLSVVKDLGLREFFTGQVEIVSGELGDDFTYYLVSSEQVPSSVGV---GVLVNPDNTILAAGGFIIQLMPGTDDETITKIEQRLSQVEPISKLIQKGLTPEEILEEVLGEKP-EILETMPVRFHCPCSKERFETAILGLGKKEIQDMIEEDGQAEAVCHFCNEKYLFTKEELEGLRDQTTR |
3M7M Chain:X ((7-232)) | -DQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNVLAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVA---RVQGEIPENA--DLKTLVG-NGYVVITITPSEGERYQGVVGLEGDTLAADLEDYFMRSEELPTRLFIRTGDVDGKP-----AAGGMLLQVMPAQNAQQ-DDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEVTVYDPQDVEFKC-------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M7M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99078 for 1816 contacts (-54.6/contact) +
2D Compatibility (PS) -23483 + (NN) -2706 + (LL) 4820
1D Compatibility (HY) -10800 + (ID) 2750
Total energy: -133997.0 ( -73.79 by residue)
QMean score : 0.449
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