Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAQRRPAGKKIPFQKDSFLQQFEKLAQSRKHHVLLESARGGRYSIAGLDPIATVKGKDGITTIKHGDEMLFKEGDPLRAFHSWFKTLETETNHEFPDFQGGAIGFLSYDYARYIENFKMLSLDDLETPDIYFLVFDDIAVYDHQEESLWLITHV-NGSDQETA--DVKLSELEQMWLTE----LPAVTSREMKPETAGSFAAPFTEDGFSQAVEKIKQYIASGDVFQVNLSIRQSQSLSVHPYQIYKTLREVNPSPYMAYLETPDFQIICGSPE--LLVSKKGKLLETRPIAGTRSRGK------TNEEDEALANELIHNEKERAEHVMLVDLERNDLGRVSRYGSVRVNEFMAIEKYSHVMHIVSNVQGELQDGYDAVDIIHAVFPGGTITGAPKVRTMEIIEELEPTRRGLYTGSIGWFGYNHDLQFNIVIRTIYATGGQAFMQSGAGVVIDSVPKHEYKESFKKAFAMQRALELSEEETKIR |
1I1Q Chain:A ((148-510)) | -------------------------------------------------------------------------------------------------------GLFAYDLVAGFEALPHLEAGN-NCPDYCFYLAETLMVIDHQKKSTRIQASLFTASDREKQRLNARLAYLSQ-QLTQPAPPLPVTPVPDMRCECNQS------DDAFGAVVRQLQKAIRAGEIFQVVPSRRFSLPCP-SPLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDAASRQIEIYPIAGTRPRGRRADGTLDRDLDSRIELDMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDRYSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIADAEGQRRGSYGGAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGIVLDSVPQSEADETRNKARAVLRAI---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I1Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110765 for 2720 contacts (-40.7/contact) +
2D Compatibility (PS) -37746 + (NN) -13576 + (LL) 8036
1D Compatibility (HY) -22800 + (ID) 6750
Total energy: -183601.0 ( -67.50 by residue)
QMean score : 0.388
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