Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIYVNGRYMEEKDAVLSPFDHGFLYGIGVFETFRLYEGCPFLLDWHIERLERALKDLQIEYTVSKHEILEMLDKLLKLNDIKDGNARVRLNISAGISDKGF-VAQTYDKPTVLCFVNQLKPESLPLQKEGKVLSIRRNTPEGSFRLKSHHYLNNMYAKREIGNDPRVEGIFLTEDGAVAEGIISNVFWRKGRCIYTPSLDTGILDGVTRRFIIENAKDIGLELKTGRYELEALLTADEAWMTNSVLEIIPFTKIE-EVNYGSQSGEATSALQLLYKKEIKNMIHEKGGRAWRSTQ |
| 2DAA Chain:A ((6-277)) | ----NDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVYNGEMFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHELVEKNELNTGH--IYFQVTRGTSPRAHQFPENTVKPVIIGYTKE-NPRPLENLEKGVKATFVEDIRWLRCDIKSLNLLGAVLAKQEAHEKGCYEAI-LHRNNTVTEGSSSNVFGIKDGILYTHPANNMILKGITRDVVIACANEINMPVKEIPFTTHEALKMDELFVTSTTSEITPVIEIDGKLIRDGKVGEWTRKLQKQFETKIP--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106377 for 2118 contacts (-50.2/contact) +
2D Compatibility (PS) -29037 + (NN) -11549 + (LL) 2092
1D Compatibility (HY) -14800 + (ID) 3450
Total energy: -163121.0 ( -77.02 by residue)
QMean score : 0.465
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