Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTREVRWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
4CYU Chain:B ((7-138))
----AYLGLGSNIGDRESQLNDAIKILNEYDGISVSNISPIYETAP---TEQPNFLNLCVEIQTTLTVLQLLECCLKTEECLHRIRKERWGPRTLDVDILLYGEEMIDLPKLSVPHPRMNERAFVLIPLNDIAANV-------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4CYU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92799 for 955 contacts (-97.2/contact) +
2D Compatibility (PS) -13451 + (NN) -3415 + (LL) 2404
1D Compatibility (HY) -13200 + (ID) 3300
Total energy: -123761.0 ( -129.59 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_4CYU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CYU-query.scw
PDB file :
Tito_Scwrl_4CYU.pdb
: