Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHNISDIIEQYLKRVLDQNGKEILEIKRSEIADKFQCVPSQINYVINTRFTSERGYIVESKRGGGGYIRIIKIKMNNEVVLINN-IISQINTHLSQAASDDIILRLLEDKVISEREAKMMVSVMDRSVLHIDLPERDELRARMMKAMLTSLKLK
3H0D Chain:A ((1-152))
--PNISDIIEQYLKQVLNMSDQDIVEIKRSEIANKFRCVPSQINYVINTRFTLERGYIVESKRGGGGYIRIMKVKTKSEA-QLIDQLLELIDHRISQSSAEDVIKRLMEEKVISEREAKMMLSVMDRSVLYIDLPERDELRARMLKAMLTSLKYK
General information:
TITO was launched using:
RESULT:
Template:
3H0D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92884 for 989 contacts (-93.9/contact) +
2D Compatibility (PS) -16462 + (NN) -7860 + (LL) 228
1D Compatibility (HY) -20000 + (ID) 5450
Total energy: -142428.0 ( -144.01 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_3H0D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3H0D-query.scw
PDB file :
Tito_Scwrl_3H0D.pdb
: