Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKEKKGAKHELDLSSILQFVAPGTPLRAGMENVLRANTGGLI-VVGYNDKVKEVVDGGFHINTAFSPAHLYELAKMDGAIILSDSGQKILYANTQLMPDATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQENMKYTLKDIGFILTKANQAIQTLEKYKTILDKTINALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIKLQVIELITDMEEEAALFIKDYVKEKIKDPFVLLKELQDMSSYDLLDDSI---------VYKLLGYPA--STNLDDY-VLPRGYRLLNKIPRLPMPIVENVVEAFGVLPRIIEASAEELDEVEGIGEVRAQKIKKGLKRLQEKHYLDRQL
4YVZ Chain:A ((35-373))-----------------IKLISPGTELRKALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYELSKMDGAIVLSEDITKIYYANVHLVPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISLYYKNYKYVVNQVDFLISKVTQAISTLEKYKDNFNKLLSELEVLELENRVTLADVVRTLAKGFELLRIVEEIRPYIVELGEEGRLARMQLRELTEDVDDLLVLLIMDYSSE----------EVEEETAQNILQDFITRREPSPISISRVLGYDVQQAAQLDDVLVSARGYRLLKTVARIPLSIGYNVVRMFKTLDQISKASVEDLKKVEGIGEKRARAISESISSLKHR-------


General information:
TITO was launched using:
RESULT:

Template: 4YVZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -197070 for 2541 contacts (-77.6/contact) +
2D Compatibility (PS) -35662 + (NN) -14325 + (LL) 2704
1D Compatibility (HY) -33200 + (ID) 7550
Total energy: -285103.0 ( -112.20 by residue)
QMean score : 0.591

(partial model without unconserved sides chains):
PDB file : Tito_4YVZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YVZ-query.scw
PDB file : Tito_Scwrl_4YVZ.pdb: