Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQQHDYVIGKNAVIETLKSDRKLYKLWMAENTVKGQAQQVIELAKKQGITIQYVPRKKLDQMVTGQHQGVVAQVAAYEYAELDDLYKAAEEKNEQP-FFLILDELEDPHNLGSIMRTADAVG---AHGIVIPKRRAVGLTTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASARED---FRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVGE |
| 1V2X Chain:A ((17-172)) | --------------------------------------------------------------------------------------------RRRQPDLTVLLENVHKPHNLSAILRTCDAVGVLEAHAV-----NPTGGVPTFNETSGGSHKWVYLRVHPDLHEAFRFLKERGFTVYAT--ALREDARDFREVDYTKPTAVLFGAEKWGVSEEALALADGAIKIPMLGMVQSLNVSVAAAVILFEAQRQRLKAG- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98271 for 1159 contacts (-84.8/contact) +
2D Compatibility (PS) -16718 + (NN) -8621 + (LL) 8932
1D Compatibility (HY) -7600 + (ID) 2800
Total energy: -125078.0 ( -107.92 by residue)
QMean score : 0.552
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