Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDILLVDGYNMIGAWPQLKDLKANSFEEARDVLIQKMAEYQS----YTGNRVIVVFDAHL----VKGLEKKQTNHRVEVIFTKENETADERIEKLAQALNNIATQIHVATSDYTEQWAIFGQGALRKSARELLREVETIERRIERRVRKITSEKPAGKIALSEEVLKTFEKWRRGDLD
1WYW Chain:A ((89-150))
---------------PGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKI-----------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1WYW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20166 for 264 contacts (-76.4/contact) +
2D Compatibility (PS) -5688 + (NN) -1070 + (LL) 10256
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -23168.0 ( -87.76 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_1WYW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WYW-query.scw
PDB file :
Tito_Scwrl_1WYW.pdb
: