Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEEETDIKNGKKKVVKKKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLLPGEAETILKRMGMDERKTDIDFELKETVKVIDGPFANFTGSIEEIDYDKSKVKVFVNMFGRETPVELEFTQIDKL
2K06 Chain:A ((6-115))
-KKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMVPTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIG--GTSDRPAPISDKEVDAIMNRL----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2K06.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42942 for 734 contacts (-58.5/contact) +
2D Compatibility (PS) -12201 + (NN) -6950 + (LL) 4612
1D Compatibility (HY) -11200 + (ID) 2250
Total energy: -70931.0 ( -96.64 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_2K06.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2K06-query.scw
PDB file :
Tito_Scwrl_2K06.pdb
: