Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEHYYSEKPSVKSNKQTWSFRLRNKDFTFTSDSGVFSKKEVDFGSRLLIDSFEEPEVEGGILDVGCGYGPIGLSLASDFKDRTIHMIDVNERAVELSNENAEQNGITNVKIYQSDLFSNVDSAQTFASILTNPPIRAGKKVVHAIFEKSAEHLKASGELWIVIQKKQGAPSAIEKLEELFDEVSVVQKKKGYYIIKAKKV |
2B3T Chain:A ((107-185)) | -------------------------------------------------------PEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSAL-AGQQFAMIVSNPP------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2B3T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -38563 for 575 contacts (-67.1/contact) +
2D Compatibility (PS) -8968 + (NN) -5713 + (LL) 9048
1D Compatibility (HY) -5600 + (ID) 1800
Total energy: -51596.0 ( -89.73 by residue)
QMean score : 0.546
|
|
|