Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL
4TZW Chain:A ((2-82))
-SYDKVSQAKSIIIGTKQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKACGIEVGAAAVAIIL
General information:
TITO was launched using:
RESULT:
Template:
4TZW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33571 for 584 contacts (-57.5/contact) +
2D Compatibility (PS) -8255 + (NN) -1542 + (LL) 208
1D Compatibility (HY) -7600 + (ID) 2900
Total energy: -53660.0 ( -91.88 by residue)
QMean score : 0.535
(partial model without unconserved sides chains):
PDB file :
Tito_4TZW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TZW-query.scw
PDB file :
Tito_Scwrl_4TZW.pdb
: