Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQAKAVARTVRIAPRKARLVMDLIRGKQVGEAVSILNLTPRAASPIIEKVLKSAIANAEHNYEMDANNLVISQAFVDEGPTLKRFRPRAMGRASQINKRTSHITIVVSEKKEG
4WFA Chain:P ((1-112))
MEAKAVARTIRIAPRKVRLVLDLIRGKNAAEAIAILKLTNKASSPVIEKVLMSALANAEHNYDMNTDELVVKEAYANEGPTLKRFRPRAQGRASAINKRTSHITIVVSDGKE-
General information:
TITO was launched using:
RESULT:
Template:
4WFA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62772 for 809 contacts (-77.6/contact) +
2D Compatibility (PS) -11495 + (NN) -742 + (LL) -172
1D Compatibility (HY) -11200 + (ID) 4050
Total energy: -90431.0 ( -111.78 by residue)
QMean score : 0.605
(partial model without unconserved sides chains):
PDB file :
Tito_4WFA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WFA-query.scw
PDB file :
Tito_Scwrl_4WFA.pdb
: