Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLLPKRVKYRREHRGKMRGRAKGGTEVHFGEFGIQALEASWITNRQIEAARIAMTRYMKRGGKVWIKIFPSKPYTAKPLEVRMGSGKGAPEGWVAVVKPGKVLFEISGVSEEVAREALRLASHKLPIKTKFVKREEIGGESNES
1WKI Chain:A ((1-135))
MLMPRRMKYRKQQRGRLKGATKGGDYVAFGDYGLVALEPAWITAQQIEAARVAMVRHFRRGGKIFIRIFPDKPYTKKPLEVRMGKGKGNVEGYVAVVKPGRVMFEVAGVTEEQAMEALRIAGHKLPIKTKIVRRD---------
General information:
TITO was launched using:
RESULT:
Template:
1WKI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41477 for 879 contacts (-47.2/contact) +
2D Compatibility (PS) -14824 + (NN) -8287 + (LL) 36
1D Compatibility (HY) -15600 + (ID) 4350
Total energy: -84502.0 ( -96.13 by residue)
QMean score : 0.555
(partial model without unconserved sides chains):
PDB file :
Tito_1WKI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WKI-query.scw
PDB file :
Tito_Scwrl_1WKI.pdb
: