Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVKQATPGGVVKKGEVVKAVIVRTKSGARRSDGSYISFDENACVIIRDDKSPRGTRIFGPVARELRENNFMKIVSLAPEVI
4WFA Chain:H ((1-122))
MIQQETRLKVADNSGAREVLTIKVLGGSGRKTANIGDVIVCTVKNATPGGVVKKGDVVKAVIVRTKSGVRRNDGSYIKFDENACVIIRDDKGPRGTRIFGPVARELREGNFMKIVSLAPEVL
General information:
TITO was launched using:
RESULT:
Template:
4WFA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79124 for 956 contacts (-82.8/contact) +
2D Compatibility (PS) -13706 + (NN) -7635 + (LL) 0
1D Compatibility (HY) -16000 + (ID) 5700
Total energy: -122165.0 ( -127.79 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_4WFA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WFA-query.scw
PDB file :
Tito_Scwrl_4WFA.pdb
: