Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVKKEKGRKRFRKRKTFGNQILPLELLIEKNKREIINSAELMEEIYMKIDEKHTQCVTK
2WQ1 Chain:A ((2-11))
------------------------------------------MKQLEDKIEE--------
General information:
TITO was launched using:
RESULT:
Template:
2WQ1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -825 for 30 contacts (-27.5/contact) +
2D Compatibility (PS) -1024 + (NN) -561 + (LL) 3928
1D Compatibility (HY) -400 + (ID) 200
Total energy: 918.0 ( 30.60 by residue)
QMean score : 0.345
(partial model without unconserved sides chains):
PDB file :
Tito_2WQ1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WQ1-query.scw
PDB file :
Tito_Scwrl_2WQ1.pdb
: