Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MMDSMIIGKYVPGTSLVHRLDPRTKLITIFLFVCIVFLANNVQTYALLGLFTIGVVSLTRVPFSFLMKGLKPIIWIVLFTFLLHILMTHEGPIIFQIGFFKVYEGGLVQGIFISLRFVYLILITTLLTLTTTPIEITDGMEQLLNPLKKLKLPVHELALMMSISLRFIPTLMEETDKIMKAQMARGVDFTSGPVKERVKAIVPLLVPLFVSAFKRAEELAVAMEARGYQGGEGRTKYRKLVWTGKDTSVIVSLIVLAALLFFLRA |
| 3GNA Chain:A ((77-88)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HRQADELEAIMQ----------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GNA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 746 for 39 contacts (19.1/contact) +
2D Compatibility (PS) -1345 + (NN) -671 + (LL) 22928
1D Compatibility (HY) 0 + (ID) 200
Total energy: 21458.0 ( 550.21 by residue)
QMean score : 0.304
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