Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRLKCTISYDGHLFNGYQVQPGKRTVQDELEKALAVLHKSKDRIPVVSSGRTDSGVHAAGQVIHFDTPLSIPAERWPYALNALLPDDIAVKQAEIADDGFHARFSAVKKEYRYFVYTEK-HPDVFKRHYAYHFSYRLNVQDMREAAKHLIGTHDFTSFCAAKTEVQDKVRTIYELDWTETADGLQMRITGSGFLYNMVRIIAGTLLDAGIGKISPDEVKSMLEAKDREAAGRTAPGHGLYLWNVYYDN
2NRE Chain:A ((11-254))-KIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQV--ANEPITVFCAGRTDAGVHGTGQVVHFETTALRKDAAWTLGVNANLPGDIAVRWVKTVPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVT-HFYEPLDAERMHRAAQCLLGENDFTSFRAV-----TPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPD


General information:
TITO was launched using:
RESULT:

Template: 2NRE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124734 for 1916 contacts (-65.1/contact) +
2D Compatibility (PS) -25665 + (NN) -13777 + (LL) 940
1D Compatibility (HY) -19200 + (ID) 4400
Total energy: -186836.0 ( -97.51 by residue)
QMean score : 0.405

(partial model without unconserved sides chains):
PDB file : Tito_2NRE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2NRE-query.scw
PDB file : Tito_Scwrl_2NRE.pdb: