Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKKLKWLSFLLGFIILLFLFKYQFSNNDSWKPWSLPLSGKIIYLDPGHGGPDGGAVG--GKLLEKDVTLEVAFRVRDYLQEQGAL-VIMTRESDTDLAPEGTKGYSRRKAEDLRQRVKLINHSEAELYISIHLNAIPSQKWSGAQSFYYGKYAENEKVAKYIQDELRRNL---ENTTRKAKRIHGIYLMQNVTKPGALIEVGFLSNPSEATLLGKPKYQDKVASSIYKGILRYFTEKGDPPE
1JWQ Chain:A ((2-179))----------------------------------------KVVVIDAGHGAKDSGAVGISRKNYEKTFNLAMALKVESILKQNPKLEVVLTRSDDTFL--------------ELKQRVKVAENLKANVFVSIHANSSGSSASNGTETYY------QRSASKAFANVMHKYFAPATGLTDRGIRYGNFHVIRETTMPAVLLEVGYLSNAKEEATLFDEDFQNRVAQGIADGITEYLDVK-----


General information:
TITO was launched using:
RESULT:

Template: 1JWQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65815 for 1497 contacts (-44.0/contact) +
2D Compatibility (PS) -18714 + (NN) -9168 + (LL) 3316
1D Compatibility (HY) -13600 + (ID) 2950
Total energy: -106931.0 ( -71.43 by residue)
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_1JWQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JWQ-query.scw
PDB file : Tito_Scwrl_1JWQ.pdb: