Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNHFYVWHIKRVKQLIIILIAAFAAASFFYIQRAVPLPVFSTDTGPKAIYKGETDSKDISLTFDISWGDERAEPILNTLKANGIKNATFFLSASWAERHPDTVARIVKDGHQIGSMGYAYKNYANLESSEIKKDMNRAQTAFEKLGVKDIQLLRPPTGQFNKNVLKVAKQYNYTVVHYSVNSQDWTNPGVEKIIDNVTKQVSGGDIILLHASDSAKQTEEALPDIIHQLKEKGLKNVTVGDLIANSDAKSAEVK
2CC0 Chain:A ((7-177))
----------------------------------------------------------VGLTFDDG-PSGSTQSLLNALRQNGLR-ATMFNQGQYAAQNPSLVRAQVDAGMWVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAGGGTPKLFRPPYGETNATLRSVEAKYGLTEVIWDVDSQDWNNASTDAIVQAVSR-LGNGQVILMH--DWPANTLAAIPRIAQTLAGKGL--------------------
General information:
TITO was launched using:
RESULT:
Template:
2CC0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69126 for 1454 contacts (-47.5/contact) +
2D Compatibility (PS) -18842 + (NN) -11361 + (LL) 6492
1D Compatibility (HY) -11200 + (ID) 2700
Total energy: -106737.0 ( -73.41 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_2CC0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CC0-query.scw
PDB file :
Tito_Scwrl_2CC0.pdb
: