Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYSKQWTRIILITSPFAIALSLLLSILYGAKHLSTDIVFTSLIHFDPGNTDHQIIWHSRIPRAAGALLIGAALAVSGALMQGITRNYLASPSIMGVSDGSAFIITLCMVLLPQSSSIEMMIYSFIGSALGAVLVFGLAAMM--PNGFTPVQLAIIGTVTSMLLSSLSAAMSIYFQISQDLS---FWYSARLHQMSPDFLKLAAPFFLIGIIMAISL-SKKVTAVSLGDDISKSLGQKKKTIKIMAMLSVIILTGSAVALAGKIAFVGLVVPHITRFLVGSDYSRLIPCSCILGGIFLTLCDLASRFINYPFETPIEVVTSIIGVPFFLYLIKRKGGEQNG |
| 1L7V Chain:A ((52-324)) | ------------------------------------------------------VWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAG-VGLIAAVLLGQG---QLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMT-WAIYFSTSVDLRQLMYWMMGGFGGV--DWRQSWLMLALIPVLLWICCQSRPMNMLALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASALLLADIVARLALAAAELPIGVVTATLGAPVFIWLLLKA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1L7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -273314 for 2323 contacts (-117.7/contact) +
2D Compatibility (PS) -27072 + (NN) -3190 + (LL) 4252
1D Compatibility (HY) -23200 + (ID) 4200
Total energy: -326724.0 ( -140.65 by residue)
QMean score : 0.333
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