Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILVSSCLGGIECRYNGSHAASEKIRKLVDEKKAVMACPELLGGFSTPREPAEIIGGTGEDVLNGTAKIVTASGEDVTELYMEGAAKTLAYAKEINASAVILKENSPSCGSGFIYNGTFSGKKITGSGVTAALLKQAGYRVISENELNDIL
2YXG Chain:A ((64-100))
------------------------------------------------------------DVVNGRVQVIAGAGSNCTEEAIELS----VFAEDVGADAVL--------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2YXG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6688 for 189 contacts (-35.4/contact) +
2D Compatibility (PS) -3942 + (NN) -662 + (LL) 5832
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -9260.0 ( -48.99 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_2YXG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YXG-query.scw
PDB file :
Tito_Scwrl_2YXG.pdb
: