Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFEDIPFLQYLGNAVDILLVWYVIYKLIMVIRGTKAVQLLKGIVVIVLVRMASQYLGLSTLQWLMDQAITWGFLAIIIIFQPELRRALEQLGRGRFFSRSGTPVEEAQQKTIEAITKAINYMAKRRIGALLTIERD-TGMGDYIETGIPLNAKVSSELLINIFIPNTPLHDGAVIMKNNEIAAAACYLPLSESPFI-SKELGTRHRAAVGISEVTDSLTIIVSEETGGVSVAKNGDLHRELTEEALKEMLEAEFKKNTRDTSSNRWYWRGKKNG |
| 3C1Y Chain:A ((44-155)) | -------------------------------------------------------------------------------------------------------------------LRKALDDIINANFGALIFLVDDPKKYEDVIQGGFWLDTDFSAEKLYEL-----SKMDGAIVLSEDITKIYYANVHLVPDPTIPTGETGTRHRTAERLAKQTGKVVIAVSRRRNIISL------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C1Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -81651 for 812 contacts (-100.6/contact) +
2D Compatibility (PS) -11720 + (NN) -3201 + (LL) 14460
1D Compatibility (HY) -6800 + (ID) 1550
Total energy: -90462.0 ( -111.41 by residue)
QMean score : 0.552
|
|
|