Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPDSINNGHKESHDHRISNDAEMITDEKWQAIINNDAAYNNQFFYAVKSTGIFCKPSCKSRVPKKENVCIFPNTEQALRANFRPCKRCKPTNEKMPDSEWVDLITEYIDKNFTEK-LTLESLADICHGSPYHMHRTFKKIKGITLVEYIQQVRVHAAKKYLIQTNKAIGDIAICVGIANAPYFITLFKKKTGQTPARFRQMSKMEETYNGNK |
2K9S Chain:A ((10-103)) | ---------------------------------------------------------------------------------------------------------QYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQLGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEFR------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48308 for 593 contacts (-81.5/contact) +
2D Compatibility (PS) -9802 + (NN) -3163 + (LL) 6164
1D Compatibility (HY) -6400 + (ID) 1350
Total energy: -62859.0 ( -106.00 by residue)
QMean score : 0.587
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