Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKSKGSIESEISKSITQWEKDYLGRGSVSVKTDILRDMIIVNLKGILTPAEYVVCGSKEGMLSIKQTRSELVESGIEGLKDIILKITGEKVKSFHTDLSSRTGERVMVFKLCNDLEKNLEKIL |
3ABF Chain:A ((14-45)) | -----PEKKRELVRRLTEMASRLLGEPYEEVRVILYE--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ABF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6700 for 139 contacts (48.2/contact) +
2D Compatibility (PS) -3502 + (NN) 162 + (LL) 6940
1D Compatibility (HY) -2400 + (ID) 250
Total energy: 7650.0 ( 55.04 by residue)
QMean score : 0.348
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