Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRFLKALPRRAEVQYDCLDRTLETQENVNLNIRVNVKEVATWGVNTCIISLKGLDNADDRFVLPEVNTALA----LFPLSIAADCLLMLPCISVVMSISSVMKSVTVE
4S1W Chain:A ((286-336))
----------------------------------NVKEVVARGAHPCIISMEGLEKEGDTYVIPHVHELLTPLVSVVALQLISYY-----------------------
General information:
TITO was launched using:
RESULT:
Template:
4S1W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11495 for 217 contacts (-53.0/contact) +
2D Compatibility (PS) -5178 + (NN) -3116 + (LL) 5640
1D Compatibility (HY) -6000 + (ID) 900
Total energy: -21049.0 ( -97.00 by residue)
QMean score : 0.137
(partial model without unconserved sides chains):
PDB file :
Tito_4S1W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4S1W-query.scw
PDB file :
Tito_Scwrl_4S1W.pdb
: