Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANKELKRGLGARHIQMIALGGTIGVGLFMGSASTISWTGPSVLLAYAICGIFIFFIMRAMGEMLYVEPSTGSFATFGHQYIHPMAGYITAWSNWFQWIIVGMSEIIAVGSYTKYWFPDLPAWIPGIVAMVILGA------ANLISVKSFGEFEFWFAMIKIVTIILMIIAGIGIIFFG-FGNGGDAIGLSNLWSHGGFFAGGFSGFFFALSLVIAAYQGVELIGITAGEAKDPQNTLRNAIQSIIWRILI---FYIGAIFVIVTVYPWDELNSLGSPF-VSTFSKIGITAAAGIINFVVITAAMSGCNSGIFSAGRMLYTLGVNGQAPKFFKKISRNGVPLYGTIAVLIGLAVGVVL-----NYIAP--PKIFVYVYSASVLPGMIPWF-----IILISHIGFRKAKGAALDKHPFKMPFAPFTNYLTIAFLLMVLVGMWFNDDTRISLIVGVIFLALVVISYYVFGIGKRTQANLTKSEQAAE |
| 3NCY Chain:A ((10-384)) | ---------VGLIPVTLMVSGNIMGSGVFLLPAN-LAATGGIAIYGWLVTIIGALALSMVYAKMSSLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKD--PLVLTLTCVAVLWIFVLLNIVGPKMITR-------VQAVATVLALVPIVGIAVFGWFWFKGE-------WNVSGM--NTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPK---RNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTAGA-IVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFAR-----TPVAGL------LIVGVLMTIFQFSSMSPNAAKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKAR----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NCY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -303212 for 2923 contacts (-103.7/contact) +
2D Compatibility (PS) -34641 + (NN) -1811 + (LL) 10132
1D Compatibility (HY) -23600 + (ID) 4450
Total energy: -357582.0 ( -122.33 by residue)
QMean score : 0.236
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