Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNQLHRRMGTFSLMMVGLGSMIGSGW--LFGAWRAAQIAGPAAIISWVIGMVVILFIALSYSELGSMFPEAGGMVKYTQYSHGSFIGFIAGWAN---WIAIVSVIPVEAVASVQYMSSWPWEWAKWTSGLVKNGTLTGEGLAFASVLLLIYFL-LNYWTVNLFSKANSLITIFKIIIPGLTIGALLFVGFHGENFTGGQSIAPNGWASVLTAVATSGIVFA-------FNGFQSPINMAGEAKNPGKSIPIAVVGSLFVATVIYVLLQIAFIGAVNPSDIAHGWSHLNFNSPFADLAIAL-----NINWLVIVLYADAFVSPSGTGITYTATTSRMIYGMEKNKYMPSIFGKLHPIYGVPRQAMFFNLIVSFIFLFLFRGWGVLAEIISVATLISYITGPITVMTLRRTGKDLYRPLRLKGLNVIAPLGFIFASLVLYWARWPLTGQVLFIILIGLPIYFYYQAKAKWKGFGRNFKAGVWMVFYLLAMMVISYLGSDKFGGLNVIHYGWDMVLIAMVSLVFYVWALKSGYQTEYLKDAKEINSQLLNGQSEAAAGKE
3GIA Chain:A ((3-356))--LKNKKLSLWEAVSMAVGVMIGASIFSIFGV--GAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDNI--ITGALSILLWMSYVISIALFAKGFAGYF--LP----------LINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILGLFI------------FAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVAISAIGNLPIDELIKASEN--------ALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGG--ANVAYSLAKDGELPEFFER--KVWFKSTEGLYITSALGVLFALLFNMEGV-ASITSAVFMVIYL----------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GIA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1738 -246544 -141.86 -733.76
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -141.86
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.364

(partial model without unconserved sides chains):
PDB file : Tito_3GIA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GIA-query.scw
PDB file : Tito_Scwrl_3GIA.pdb: