Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFNTAVKILYRSLIELTNHRLSSYLIKGFCESKISKPVIPLFSKHFRLNWDDVDGTAADYGSLSELFIRQINLERRPVSKEAHAVVSPVDGVVQTVGIINPNQTFTVKGKDYSFAELTGCKSADHQYNGGYFVVLYLSPRHYHRFHSPISCRYQKLAELGNRSYPVNQLGLKYGKDVLSKNYRFVYELNSGSRNVLMIPVGAMNI---NS-IVQTNT-RTELEIGEELGYFSF------G--STVILVFEKDA-FQPSAHLAEGQEVQVGELIGYEE
2GPR Chain:A ((12-157))---------------------------------------------------------------------------------NLKVLAPCDGTIITLDEVEDE-VFKE-----------------RMLGDGFA----INPKS-NDFHAPVSGKLVTAF-----------------------PTKHAFGIQTKSGVEILLHIGLDTVSLDGNGFESFVTQDQEVNAGDKLVTVDLKSVAKKVPSIKSPIIFTNNGGKTLE--IVKMGEVKQGDVVAI--


General information:
TITO was launched using:
RESULT:

Template: 2GPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 739 -84974 -114.98 -643.74
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.61

3D Compatibility (PKB) : -114.98
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.387

(partial model without unconserved sides chains):
PDB file : Tito_2GPR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GPR-query.scw
PDB file : Tito_Scwrl_2GPR.pdb: